Protein Visualization

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Contents

Project Overview

The goal of this project is to provide access to protein structures from the PDB in the CAVE. This project has gone through many revisions, in its current form it uses pymol to generate models from PDB files, that are accessed in realtime from the PDB.

File:Protein.png

Video of user interacting with a protein on the c-wall

Features

  • Three views per structure, Cartoon, Stick, Surface
  • Cache for generated models
  • Collabration between enviroments supported
  • Multiple structure support

Status

Currently under continued development

Todo

  • Integrate PDBSequence module
  • Add alignment support for structures

Participants

Jurgen Schulze: Project advisor.

Philip Weber: Software developer.