Difference between revisions of "Sara Richardson"

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== Progress ==
 
== Progress ==
Updated: July 2, 11:00
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Updated: July 2, 16:30
  
 
=== Week 1 ===
 
=== Week 1 ===
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Attended "How to Conduct Research" by Prof. Trey Ideker as a part of the Calit2 Scholars Colloquia Program
 
Attended "How to Conduct Research" by Prof. Trey Ideker as a part of the Calit2 Scholars Colloquia Program
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Began working on CAMERAVis plug-in for OpenCOVER
  
  

Revision as of 15:28, 2 July 2007

Contents

Sara Richardson

I am a second year UCSD Bioengineering student and a Calit2 Summer Undergraduate Research Scholar working with Jürgen Schulze.

I can be contacted at serichardson@ucsd.edu or 858-539-9950.


Project

After the success of the Human Genome Project, J. Craig Venter launched the Sorcerer II Global Ocean Sampling (GOS) Expedition to collect microbes and analyze their DNA sequences. Along with the microbial data, researchers also collected various metadata (location, depth, microbe size, temperature, salinity, pH, DO). This project will create a 3D visulazation of this metadata through the use of visualization technology. The display can then be used by researchers as a visually immersive way to look for particularly interesting data sites or relations between sites, with the ultimate goal of finding microbes with DNA that produce useful proteins.

GOSmap.jpg


Progress

Updated: July 2, 16:30

Week 1

Researched available information on GOS/CAMERA and related visualization

Drafted initial ideas for visualization on the OSSIMplant software

Met with Paul Gilna to discuss ideas for and focus of the project

Began reading up on C++ programming language

Week 2

Continued reading about C++ programming language

Attended "How to Conduct Research" by Prof. Trey Ideker as a part of the Calit2 Scholars Colloquia Program

Began working on CAMERAVis plug-in for OpenCOVER


Links

Camera Portal

PLoS Biology Publication of the GOS

J. Craig Venture Institute (JCVI)